vti_encoding:SR|utf8-nl vti_timelastmodified:TR|03 Mar 2016 19:44:22 -0000 vti_extenderversion:SR|12.0.0.0 vti_author:SR|K20\\James vti_modifiedby:SR|K20\\James vti_timecreated:TR|03 Mar 2016 19:44:22 -0000 vti_cacheddtm:TX|03 Mar 2016 19:44:22 -0000 vti_filesize:IR|16497 vti_cachedtitle:SR|HTML5-only and WebGL Jmol Demo vti_cachedbodystyle:SR|
vti_cachedlinkinfo:VX|S|jquery/jquery.js S|js/JSmoljQueryExt.js S|js/JSmolCore.js S|js/JSmolApplet.js S|js/JSmolApi.js S|js/JSmolControls.js S|js/j2sjmol.js S|js/JSmol.js S|js/JSmolConsole.js S|js/JSmolMenu.js S|js/JSmolThree.js S|js/JSmolGLmol.js H|http://chemapps.stolaf.edu/jmol/zip/Jmol.zip H|javascript:Jmol.script(jmolApplet0,'console') H|javascript:Jmol.script(jmolApplet0,'image') H|javascript:Jmol.script(jmolApplet0,'set\\ antialiasDisplay\\ false') H|javascript:Jmol.script(jmolApplet0,'set\\ antialiasDisplay\\ true') H|javascript:Jmol.script(jmolApplet0,'set\\ platformSpeed\\ 8') H|javascript:Jmol.script(jmolApplet0,'set\\ platformSpeed\\ 7') H|javascript:Jmol.script(jmolApplet0,'set\\ platformSpeed\\ 6') H|javascript:Jmol.script(jmolApplet0,'set\\ platformSpeed\\ 5') H|javascript:Jmol.script(jmolApplet0,'set\\ platformSpeed\\ 4') H|javascript:Jmol.script(jmolApplet0,'set\\ platformSpeed\\ 3') H|javascript:Jmol.script(jmolApplet0,'set\\ platformSpeed\\ 2') H|javascript:Jmol.script(jmolApplet0,'set\\ platformSpeed\\ 1') H|javascript:Jmol.showInfo(jmolApplet0,\\ true) H|javascript:Jmol.clearConsole(jmolApplet0) H|javascript:Jmol.showInfo(jmolApplet0,\\ false) H|javascript:Jmol.script(jmolApplet0,'select\\ *;cartoons\\ off;spacefill\\ only') H|javascript:Jmol.script(jmolApplet0,'select\\ *;cartoons\\ off;wireframe\\ -0.1') H|javascript:Jmol.script(jmolApplet0,'select\\ *;cartoons\\ off;spacefill\\ 23%;wireframe\\ 0.15') H|javascript:Jmol.script(jmolApplet0,'select\\ protein\\ or\\ nucleic;cartoons\\ only') H|javascript:Jmol.script(jmolApplet0,'set\\ cartoonFancy\\ true') H|javascript:Jmol.script(jmolApplet0,'set\\ cartoonFancy\\ false') H|javascript:Jmol.script(jmolApplet0,'set\\ cartoonFancy\\ false;set\\ hermitelevel\\ 0') H|javascript:Jmol.script(jmolApplet0,'color\\ property\\ atomno') H|javascript:Jmol.script(jmolApplet0,'color\\ cpk') H|javascript:Jmol.script(jmolApplet0,'color\\ structure') H|javascript:Jmol.script(jmolApplet0,'select\\ *;isosurface\\ vdw') H|javascript:Jmol.script(jmolApplet0,'isosurface\\ delete') H|javascript:Jmol.script(jmolApplet0,'if\\ ({atomno\\ <\\ 10}.partialcharge\\ ==\\ 0){calculate\\ partialcharge};isosurface\\ vdw\\ map\\ mep') H|javascript:Jmol.script(jmolApplet0,'isosurface\\ translucent') H|javascript:Jmol.script(jmolApplet0,'isosurface\\ opaque') H|javascript:Jmol.script(jmolApplet0,'if\\ (_fileType\\ ==\\ "Pdb"){select\\ *.CA;label\\ %n%r}else{select\\ *;label\\ %a};select\\ *;') H|javascript:Jmol.script(jmolApplet0,'select\\ *;labels\\ off') H|javascript:Jmol.script(jmolApplet0,'font\\ echo\\ 20\\ serif;fsize=20;set\\ echo\\ top\\ center;echo\\ echo\\ test') H|javascript:Jmol.script(jmolApplet0,'if\\ (!fsize){fsize=20};fsize\\ +=\\ 4;font\\ echo\\ @fsize\\ serif;') H|javascript:Jmol.script(jmolApplet0,'if\\ (!fsize){fsize=20};fsize\\ -=\\ 4;if\\ (fsize\\ <\\ 10){fsize\\ =\\ 10};font\\ echo\\ @fsize\\ serif') H|mailto:hansonr@stolaf.edu H|http://chemapps.stolaf.edu/jmol/docs H|test2.htm H|test2.htm H|test2.htm H|test2.htm H|javascript:Jmol.search(jmolApplet0,'=caffeine H|javascript:Jmol.search(jmolApplet0,'=1blu H|javascript:Jmol.search(jmolApplet0,'=1crn H|javascript:Jmol.script(jmolApplet0,'load\\ =1blu;\\ set\\ echo\\ top\\ left;echo\\ loading\\ map\\ file...;refresh;isosurface\\ "=1blu"\\ mesh\\ nofill;echo') H|javascript:Jmol.script(jmolApplet0,'load\\ data/1cbs.cif;\\ set\\ echo\\ top\\ left;echo\\ loading\\ map\\ file...;refresh;isosurface\\ downsample\\ 2\\ cutoff\\ 0.5\\ boundbox\\ "data/1cbs_2fofc.map"\\ mesh\\ nofill;isosurface\\ display\\ within\\ 2.0\\ {*};echo') H|javascript:Jmol.script(jmolApplet0,'load\\ H|javascript:Jmol.script(jmolApplet0,'minimize') H|javascript:Jmol.script(jmolApplet0,'set\\ modelkitmode;set\\ picking\\ dragMinimize') H|javascript:Jmol.script(jmolApplet0,'!quit;set\\ modelkitmode\\ false;set\\ picking\\ ident;') H|javascript:Jmol.script(jmolApplet0,'script\\ data/flexfit.spt') H|javascript:Jmol.script(jmolApplet0,'load\\ data/dna.pse') H|javascript:Jmol.script(jmolApplet0,'load\\ data/estron.cml;delete\\ molecule!=1;moveto\\ /*\\ time,\\ axisAngle\\ */\\ 0.0\\ {\\ -569\\ -266\\ 778\\ 170.22}\\ /*\\ zoom,\\ translation\\ */\\ 210.8\\ 0.0\\ 0.0\\ /*\\ center,\\ rotationRadius\\ */\\ {1.612277686904762\\ 3.7877332476190473\\ 1.6109263519047616}\\ 16.399569513870535\\ /*\\ navigation\\ center,\\ translation,\\ depth\\ */\\ {0\\ 0\\ 0}\\ 9.485930041021248\\ -20.361702729557265\\ 0;') H|javascript:Jmol.script(jmolApplet0,'load\\ data/vasp.xml') H|javascript:Jmol.script(jmolApplet0,'load\\ data/water.xodydata') H|javascript:Jmol.script(jmolApplet0,'script\\ data/test.spt;background\\ black') H|javascript:Jmol.script(jmolApplet0,'pause') H|javascript:Jmol.script(jmolApplet0,'resume') H|javascript:Jmol.script(jmolApplet0,'!quit') H|javascript:Jmol.script(jmolApplet0,'!exit') H|javascript:Jmol.script(jmolApplet0,'load\\ data/caffeine.mol;if\\ (random()\\ >\\ 0.3){moveto\\ 1\\ left}else\\ if\\ (random()\\ >\\ 0.7)\\ {moveto\\ 1\\ right}\\ else\\ {moveto\\ 1\\ top};background\\ black;delay\\ 0.1;background\\ white') H|javascript:Jmol.script(jmolApplet0,'load\\ data/caffeine.mol;set\\ echo\\ top\\ center;delay\\ 1.0;echo\\ caffeine;delay\\ 1.0;set\\ selectionhalos\\ on;select\\ _O;echo\\ oxygen;delay\\ 1.0;select\\ _N;echo\\ nitrogen;delay\\ 1.0;\\ select\\ none;echo\\ hover\\ over\\ an\\ atom') H|javascript:Jmol.script(jmolApplet0,'var\\ x=antialiasDisplay;load\\ data/cyclohexaneFlip.jmol;antialiasdisplay\\ =\\ x;animation\\ mode\\ palindrome;animation\\ on') H|javascript:Jmol.script(jmolApplet0,'load\\ data/c6h6.smol\\ -3;rotate\\ x\\ 30;spin\\ on;vibration\\ on') H|javascript:Jmol.script(jmolApplet0,'load\\ data/co2.smol;mo\\ homo\\ SQUARED') H|javascript:Jmol.script(jmolApplet0,'load\\ data/1hxw.png') H|data/1hxw.png H|javascript:Jmol.script(jmolApplet0,'load\\ data/square_planar.spartan') H|javascript:Jmol.script(jmolApplet0,'load\\ data/water.xyz.gz') H|javascript:Jmol.script(jmolApplet0,'zap;pmesh\\ "data/sage.pmesh"\\ fullylit;') H|javascript:Jmol.loadFile(jmolApplet0,'data/caffeine.mol') H|javascript:Jmol.loadFile(jmolApplet0,'data/caffeine.mol',';isosurface\\ "data/caffeine.jvxl"') H|javascript:Jmol.loadFile(jmolApplet0,'data/1crn.pdb',';if\\ (_is2D)\\ {set\\ hermitelevel\\ 0}\\ else\\ {set\\ hermitelevel\\ 6;set\\ ribbonAspectRatio\\ 4};cartoons\\ only;color\\ structure;') H|javascript:Jmol.loadFile(jmolApplet0,'data/k04041.cif','load\\ ""\\ {1\\ 1\\ 1}') H|javascript:Jmol.loadFile(jmolApplet0,'data/cl2o.gamess') H|javascript:Jmol.loadFile(jmolApplet0,'data/cl2o.gamess',';model\\ 1.2;if\\ (_is2D){mo\\ mesh\\ nofill}\\ else\\ {mo\\ fill\\ nomesh};mo\\ homo') H|javascript:Jmol.script(jmolApplet0,'model\\ 1.2;mo\\ fill\\ nomesh; mo\\ lumo') H|javascript:Jmol.script(jmolApplet0,'mo\\ mesh\\ nofill') H|javascript:Jmol.script(jmolApplet0,'mo\\ fill\\ nomesh') H|javascript:Jmol.script(jmolApplet0,'set\\ echo\\ myimage\\ [0\\ 0];set\\ echo\\ myimage\\ depth\\ 50;\\ set\\ echo\\ myimage\\ image\\ "data/bob.png"') H|javascript:Jmol.script(jmolApplet0,'set\\ echo\\ myimage\\ scale\\ 0.5') H|javascript:Jmol.script(jmolApplet0,'set\\ echo\\ myimage\\ scale\\ 1.0') H|javascript:Jmol.script(jmolApplet0,'set\\ echo\\ myimage\\ scale\\ 2.0') H|javascript:Jmol.script(jmolApplet0,'set\\ echo\\ myimage\\ off') H|javascript:Jmol.script(jmolApplet0,'set\\ echo\\ myimage\\ image\\ "data/bob.png";set\\ echo\\ myimage\\ depth\\ 50') H|javascript:Jmol.script(jmolApplet0,'set\\ echo\\ myimage\\ depth\\ 100') H|javascript:Jmol.script(jmolApplet0,'set\\ echo\\ myimage\\ depth\\ 50') H|javascript:Jmol.script(jmolApplet0,'set\\ echo\\ myimage\\ depth\\ 0') H|javascript:Jmol.script(jmolApplet0,'script\\ data/cyclflip2.spt') H|javascript:Jmol.script(jmolApplet0,'!quit') H|javascript:alert('MSIE\\ cannot\\ do\\ synchronous\\ cross-domain\\ file\\ transfer,\\ so\\ if\\ you\\ want\\ to\\ do\\ that,\\ you\\ must\\ put\\ jsmol.php\\ on\\ your\\ OWN\\ server\\ and\\ point\\ to\\ it\\ using\\ Info.serverURL,\\ which\\ for\\ this\\ page\\ is\\ '\\ +\\ Info.serverURL\\ +\\ '\\\\nA\\ text\\ version\\ of\\ this\\ php\\ file\\ is\\ at\\ http://chemapps.stolaf.edu/jmol/jsmol/php/jsmol.php.txt') H|javascript:Jmol.loadFile(jmolApplet0,'$caffeine') H|javascript:Jmol.loadFile(jmolApplet0,'=1blu',';display\\ not\\ water;select\\ protein\\ or\\ nucleic;cartoons\\ only;color\\ structure;select\\ *') H|javascript:Jmol.loadFile(jmolApplet0,'=1d66',';display\\ not\\ water;select\\ protein\\ or\\ nucleic;cartoons\\ only;color\\ structure;select\\ *') H|javascript:Jmol.loadFile(jmolApplet0,'=4tra',';display\\ not\\ water;select\\ protein\\ or\\ nucleic;cartoons\\ only;color\\ structure;select\\ *') H|javascript:Jmol.loadFile(jmolApplet0,':1983') H|javascript:Jmol.loadFile(jmolApplet0,':aspirin') H|javascript:Jmol.loadFile(jmolApplet0,':smiles:CC/C=C/CC') H|javascript:Jmol.loadFile(jmolApplet0,'$CC/C=C/CC') H|javascript:Jmol.search(jmolApplet0,':caffeine',';isosurface\\ vdw\\ map\\ mep\\ translucent') H|javascript:Jmol.search(jmolApplet0,'$caffeine',';moveto\\ /*\\ time,\\ axisAngle\\ */\\ 0.0\\ {\\ -18\\ -17\\ 1000\\ 179.69}\\ /*\\ zoom,\\ translation\\ */\\ \\ 100.0\\ 0.0\\ 0.0\\ \\ /*\\ center,\\ rotationRadius\\ */\\ {-0.44874999999999954\\ 0.18930000000000002\\ -0.06529999999999997}\\ 5.536731293601459\\ /*\\ navigation\\ center,\\ translation,\\ depth\\ */\\ {0\\ 0\\ 0}\\ -4.041090898432742\\ -1.7041175988342825\\ 0;calculate\\ partialCharge;isosurface\\ vdw\\ map\\ mep\\ translucent') H|javascript:Jmol.loadFile(jmolApplet0,'==HEM') vti_cachedsvcrellinks:VX|FSUS|Manual/Operations_on_Proteins/jsmol/jquery/jquery.js FSUS|Manual/Operations_on_Proteins/jsmol/js/JSmoljQueryExt.js FSUS|Manual/Operations_on_Proteins/jsmol/js/JSmolCore.js FSUS|Manual/Operations_on_Proteins/jsmol/js/JSmolApplet.js FSUS|Manual/Operations_on_Proteins/jsmol/js/JSmolApi.js FSUS|Manual/Operations_on_Proteins/jsmol/js/JSmolControls.js FSUS|Manual/Operations_on_Proteins/jsmol/js/j2sjmol.js FSUS|Manual/Operations_on_Proteins/jsmol/js/JSmol.js FSUS|Manual/Operations_on_Proteins/jsmol/js/JSmolConsole.js FSUS|Manual/Operations_on_Proteins/jsmol/js/JSmolMenu.js FSUS|Manual/Operations_on_Proteins/jsmol/js/JSmolThree.js FSUS|Manual/Operations_on_Proteins/jsmol/js/JSmolGLmol.js NHHS|http://chemapps.stolaf.edu/jmol/zip/Jmol.zip SHUS|javascript:Jmol.script(jmolApplet0,'console') SHUS|javascript:Jmol.script(jmolApplet0,'image') SHUS|javascript:Jmol.script(jmolApplet0,'set\\ antialiasDisplay\\ false') SHUS|javascript:Jmol.script(jmolApplet0,'set\\ antialiasDisplay\\ true') SHUS|javascript:Jmol.script(jmolApplet0,'set\\ platformSpeed\\ 8') SHUS|javascript:Jmol.script(jmolApplet0,'set\\ platformSpeed\\ 7') SHUS|javascript:Jmol.script(jmolApplet0,'set\\ platformSpeed\\ 6') SHUS|javascript:Jmol.script(jmolApplet0,'set\\ platformSpeed\\ 5') SHUS|javascript:Jmol.script(jmolApplet0,'set\\ platformSpeed\\ 4') SHUS|javascript:Jmol.script(jmolApplet0,'set\\ platformSpeed\\ 3') SHUS|javascript:Jmol.script(jmolApplet0,'set\\ platformSpeed\\ 2') SHUS|javascript:Jmol.script(jmolApplet0,'set\\ platformSpeed\\ 1') SHUS|javascript:Jmol.showInfo(jmolApplet0,\\ true) SHUS|javascript:Jmol.clearConsole(jmolApplet0) SHUS|javascript:Jmol.showInfo(jmolApplet0,\\ false) SHUS|javascript:Jmol.script(jmolApplet0,'select\\ *;cartoons\\ off;spacefill\\ only') SHUS|javascript:Jmol.script(jmolApplet0,'select\\ *;cartoons\\ off;wireframe\\ -0.1') SHUS|javascript:Jmol.script(jmolApplet0,'select\\ *;cartoons\\ off;spacefill\\ 23%;wireframe\\ 0.15') SHUS|javascript:Jmol.script(jmolApplet0,'select\\ protein\\ or\\ nucleic;cartoons\\ only') SHUS|javascript:Jmol.script(jmolApplet0,'set\\ cartoonFancy\\ true') SHUS|javascript:Jmol.script(jmolApplet0,'set\\ cartoonFancy\\ false') SHUS|javascript:Jmol.script(jmolApplet0,'set\\ cartoonFancy\\ false;set\\ hermitelevel\\ 0') SHUS|javascript:Jmol.script(jmolApplet0,'color\\ property\\ atomno') SHUS|javascript:Jmol.script(jmolApplet0,'color\\ cpk') SHUS|javascript:Jmol.script(jmolApplet0,'color\\ structure') SHUS|javascript:Jmol.script(jmolApplet0,'select\\ *;isosurface\\ vdw') SHUS|javascript:Jmol.script(jmolApplet0,'isosurface\\ delete') SHUS|javascript:Jmol.script(jmolApplet0,'if\\ ({atomno\\ <\\ 10}.partialcharge\\ ==\\ 0){calculate\\ partialcharge};isosurface\\ vdw\\ map\\ mep') SHUS|javascript:Jmol.script(jmolApplet0,'isosurface\\ translucent') SHUS|javascript:Jmol.script(jmolApplet0,'isosurface\\ opaque') SHUS|javascript:Jmol.script(jmolApplet0,'if\\ (_fileType\\ ==\\ "Pdb"){select\\ *.CA;label\\ %n%r}else{select\\ *;label\\ %a};select\\ *;') SHUS|javascript:Jmol.script(jmolApplet0,'select\\ *;labels\\ off') SHUS|javascript:Jmol.script(jmolApplet0,'font\\ echo\\ 20\\ serif;fsize=20;set\\ echo\\ top\\ center;echo\\ echo\\ test') SHUS|javascript:Jmol.script(jmolApplet0,'if\\ (!fsize){fsize=20};fsize\\ +=\\ 4;font\\ echo\\ @fsize\\ serif;') SHUS|javascript:Jmol.script(jmolApplet0,'if\\ (!fsize){fsize=20};fsize\\ -=\\ 4;if\\ (fsize\\ <\\ 10){fsize\\ =\\ 10};font\\ echo\\ @fsize\\ serif') NHUS|mailto:hansonr@stolaf.edu NHHS|http://chemapps.stolaf.edu/jmol/docs FHUS|Manual/Operations_on_Proteins/jsmol/test2.htm FHUS|Manual/Operations_on_Proteins/jsmol/test2.htm FHUS|Manual/Operations_on_Proteins/jsmol/test2.htm FHUS|Manual/Operations_on_Proteins/jsmol/test2.htm SHUS|javascript:Jmol.search(jmolApplet0,'=caffeine SHUS|javascript:Jmol.search(jmolApplet0,'=1blu SHUS|javascript:Jmol.search(jmolApplet0,'=1crn SHUS|javascript:Jmol.script(jmolApplet0,'load\\ =1blu;\\ set\\ echo\\ top\\ left;echo\\ loading\\ map\\ file...;refresh;isosurface\\ "=1blu"\\ mesh\\ nofill;echo') SHUS|javascript:Jmol.script(jmolApplet0,'load\\ data/1cbs.cif;\\ set\\ echo\\ top\\ left;echo\\ loading\\ map\\ file...;refresh;isosurface\\ downsample\\ 2\\ cutoff\\ 0.5\\ boundbox\\ "data/1cbs_2fofc.map"\\ mesh\\ nofill;isosurface\\ display\\ within\\ 2.0\\ {*};echo') SHUS|javascript:Jmol.script(jmolApplet0,'load\\ SHUS|javascript:Jmol.script(jmolApplet0,'minimize') SHUS|javascript:Jmol.script(jmolApplet0,'set\\ modelkitmode;set\\ picking\\ dragMinimize') SHUS|javascript:Jmol.script(jmolApplet0,'!quit;set\\ modelkitmode\\ false;set\\ picking\\ ident;') SHUS|javascript:Jmol.script(jmolApplet0,'script\\ data/flexfit.spt') SHUS|javascript:Jmol.script(jmolApplet0,'load\\ data/dna.pse') SHUS|javascript:Jmol.script(jmolApplet0,'load\\ data/estron.cml;delete\\ molecule!=1;moveto\\ /*\\ time,\\ axisAngle\\ */\\ 0.0\\ {\\ -569\\ -266\\ 778\\ 170.22}\\ /*\\ zoom,\\ translation\\ */\\ 210.8\\ 0.0\\ 0.0\\ /*\\ center,\\ rotationRadius\\ */\\ {1.612277686904762\\ 3.7877332476190473\\ 1.6109263519047616}\\ 16.399569513870535\\ /*\\ navigation\\ center,\\ translation,\\ depth\\ */\\ {0\\ 0\\ 0}\\ 9.485930041021248\\ -20.361702729557265\\ 0;') SHUS|javascript:Jmol.script(jmolApplet0,'load\\ data/vasp.xml') SHUS|javascript:Jmol.script(jmolApplet0,'load\\ data/water.xodydata') SHUS|javascript:Jmol.script(jmolApplet0,'script\\ data/test.spt;background\\ black') SHUS|javascript:Jmol.script(jmolApplet0,'pause') SHUS|javascript:Jmol.script(jmolApplet0,'resume') SHUS|javascript:Jmol.script(jmolApplet0,'!quit') SHUS|javascript:Jmol.script(jmolApplet0,'!exit') SHUS|javascript:Jmol.script(jmolApplet0,'load\\ data/caffeine.mol;if\\ (random()\\ >\\ 0.3){moveto\\ 1\\ left}else\\ if\\ (random()\\ >\\ 0.7)\\ {moveto\\ 1\\ right}\\ else\\ {moveto\\ 1\\ top};background\\ black;delay\\ 0.1;background\\ white') SHUS|javascript:Jmol.script(jmolApplet0,'load\\ data/caffeine.mol;set\\ echo\\ top\\ center;delay\\ 1.0;echo\\ caffeine;delay\\ 1.0;set\\ selectionhalos\\ on;select\\ _O;echo\\ oxygen;delay\\ 1.0;select\\ _N;echo\\ nitrogen;delay\\ 1.0;\\ select\\ none;echo\\ hover\\ over\\ an\\ atom') SHUS|javascript:Jmol.script(jmolApplet0,'var\\ x=antialiasDisplay;load\\ data/cyclohexaneFlip.jmol;antialiasdisplay\\ =\\ x;animation\\ mode\\ palindrome;animation\\ on') SHUS|javascript:Jmol.script(jmolApplet0,'load\\ data/c6h6.smol\\ -3;rotate\\ x\\ 30;spin\\ on;vibration\\ on') SHUS|javascript:Jmol.script(jmolApplet0,'load\\ data/co2.smol;mo\\ homo\\ SQUARED') SHUS|javascript:Jmol.script(jmolApplet0,'load\\ data/1hxw.png') FHUS|Manual/Operations_on_Proteins/jsmol/data/1hxw.png SHUS|javascript:Jmol.script(jmolApplet0,'load\\ data/square_planar.spartan') SHUS|javascript:Jmol.script(jmolApplet0,'load\\ data/water.xyz.gz') SHUS|javascript:Jmol.script(jmolApplet0,'zap;pmesh\\ "data/sage.pmesh"\\ fullylit;') SHUS|javascript:Jmol.loadFile(jmolApplet0,'data/caffeine.mol') SHUS|javascript:Jmol.loadFile(jmolApplet0,'data/caffeine.mol',';isosurface\\ "data/caffeine.jvxl"') SHUS|javascript:Jmol.loadFile(jmolApplet0,'data/1crn.pdb',';if\\ (_is2D)\\ {set\\ hermitelevel\\ 0}\\ else\\ {set\\ hermitelevel\\ 6;set\\ ribbonAspectRatio\\ 4};cartoons\\ only;color\\ structure;') SHUS|javascript:Jmol.loadFile(jmolApplet0,'data/k04041.cif','load\\ ""\\ {1\\ 1\\ 1}') SHUS|javascript:Jmol.loadFile(jmolApplet0,'data/cl2o.gamess') SHUS|javascript:Jmol.loadFile(jmolApplet0,'data/cl2o.gamess',';model\\ 1.2;if\\ (_is2D){mo\\ mesh\\ nofill}\\ else\\ {mo\\ fill\\ nomesh};mo\\ homo') SHUS|javascript:Jmol.script(jmolApplet0,'model\\ 1.2;mo\\ fill\\ nomesh; mo\\ lumo') SHUS|javascript:Jmol.script(jmolApplet0,'mo\\ mesh\\ nofill') SHUS|javascript:Jmol.script(jmolApplet0,'mo\\ fill\\ nomesh') SHUS|javascript:Jmol.script(jmolApplet0,'set\\ echo\\ myimage\\ [0\\ 0];set\\ echo\\ myimage\\ depth\\ 50;\\ set\\ echo\\ myimage\\ image\\ "data/bob.png"') SHUS|javascript:Jmol.script(jmolApplet0,'set\\ echo\\ myimage\\ scale\\ 0.5') SHUS|javascript:Jmol.script(jmolApplet0,'set\\ echo\\ myimage\\ scale\\ 1.0') SHUS|javascript:Jmol.script(jmolApplet0,'set\\ echo\\ myimage\\ scale\\ 2.0') SHUS|javascript:Jmol.script(jmolApplet0,'set\\ echo\\ myimage\\ off') SHUS|javascript:Jmol.script(jmolApplet0,'set\\ echo\\ myimage\\ image\\ "data/bob.png";set\\ echo\\ myimage\\ depth\\ 50') SHUS|javascript:Jmol.script(jmolApplet0,'set\\ echo\\ myimage\\ depth\\ 100') SHUS|javascript:Jmol.script(jmolApplet0,'set\\ echo\\ myimage\\ depth\\ 50') SHUS|javascript:Jmol.script(jmolApplet0,'set\\ echo\\ myimage\\ depth\\ 0') SHUS|javascript:Jmol.script(jmolApplet0,'script\\ data/cyclflip2.spt') SHUS|javascript:Jmol.script(jmolApplet0,'!quit') SHUS|javascript:alert('MSIE\\ cannot\\ do\\ synchronous\\ cross-domain\\ file\\ transfer,\\ so\\ if\\ you\\ want\\ to\\ do\\ that,\\ you\\ must\\ put\\ jsmol.php\\ on\\ your\\ OWN\\ server\\ and\\ point\\ to\\ it\\ using\\ Info.serverURL,\\ which\\ for\\ this\\ page\\ is\\ '\\ +\\ Info.serverURL\\ +\\ '\\\\nA\\ text\\ version\\ of\\ this\\ php\\ file\\ is\\ at\\ http://chemapps.stolaf.edu/jmol/jsmol/php/jsmol.php.txt') SHUS|javascript:Jmol.loadFile(jmolApplet0,'$caffeine') SHUS|javascript:Jmol.loadFile(jmolApplet0,'=1blu',';display\\ not\\ water;select\\ protein\\ or\\ nucleic;cartoons\\ only;color\\ structure;select\\ *') SHUS|javascript:Jmol.loadFile(jmolApplet0,'=1d66',';display\\ not\\ water;select\\ protein\\ or\\ nucleic;cartoons\\ only;color\\ structure;select\\ *') SHUS|javascript:Jmol.loadFile(jmolApplet0,'=4tra',';display\\ not\\ water;select\\ protein\\ or\\ nucleic;cartoons\\ only;color\\ structure;select\\ *') SHUS|javascript:Jmol.loadFile(jmolApplet0,':1983') SHUS|javascript:Jmol.loadFile(jmolApplet0,':aspirin') SHUS|javascript:Jmol.loadFile(jmolApplet0,':smiles:CC/C=C/CC') SHUS|javascript:Jmol.loadFile(jmolApplet0,'$CC/C=C/CC') SHUS|javascript:Jmol.search(jmolApplet0,':caffeine',';isosurface\\ vdw\\ map\\ mep\\ translucent') SHUS|javascript:Jmol.search(jmolApplet0,'$caffeine',';moveto\\ /*\\ time,\\ axisAngle\\ */\\ 0.0\\ {\\ -18\\ -17\\ 1000\\ 179.69}\\ /*\\ zoom,\\ translation\\ */\\ \\ 100.0\\ 0.0\\ 0.0\\ \\ /*\\ center,\\ rotationRadius\\ */\\ {-0.44874999999999954\\ 0.18930000000000002\\ -0.06529999999999997}\\ 5.536731293601459\\ /*\\ navigation\\ center,\\ translation,\\ depth\\ */\\ {0\\ 0\\ 0}\\ -4.041090898432742\\ -1.7041175988342825\\ 0;calculate\\ partialCharge;isosurface\\ vdw\\ map\\ mep\\ translucent') SHUS|javascript:Jmol.loadFile(jmolApplet0,'==HEM') vti_cachedneedsrewrite:BR|false vti_cachedhasbots:BR|false vti_cachedhastheme:BR|false vti_cachedhasborder:BR|false vti_charset:SR|windows-1252 vti_title:SR|HTML5-only and WebGL Jmol Demo vti_backlinkinfo:VX|Manual/Operations_on_Proteins/jsmol/testsave.htm Manual/Operations_on_Proteins/jsmol/test2.htm Manual/Operations_on_Proteins/jsmol/jsmolgl.htm